S2P: A Desktop Application for Fast and Easy Processing of 2D-Gel and MALDI-Based Mass Spectrometry Protein Data
Hugo López Fernández , José E. Araújo, Daniel González Peña , Miguel Reboiro Jato , Florentino Fernández Riverola , José Luis Capelo Martínez
págs. 1-8
Multi-Enzyme Pathway Optimisation Through Star-Shaped Reachable Sets
Stanislav Mazurenko, Jiri Damborsky, Zbynek Prokop
págs. 9-17
Automated Collection and Sharing of Adaptive Amino Acid Changes Data
Noé Vázquez González, Cristina P. Vieira, Bárbara S.R. Amorim, André Torres, Hugo López Fernández , Florentino Fernández Riverola , José L.R. Sousa, Miguel Reboiro Jato , Jorge Vieira
págs. 18-25
págs. 26-34
Processing 2D Gel Electrophoresis Images for Efficient Gaussian Mixture Modeling
Michal Marczyk
págs. 35-42
Improving Document Prioritization for Protein-Protein Interaction Extraction Using Shallow Linguistics and Word Embeddings
Sérgio Matos
págs. 43-49
K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data
Muhammad Akmal Remli, Kauthar Mohd Daud, Hui Wen Nies, Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu , Shahreen Kasim, Ghazali Sulong
págs. 50-57
Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches
Hui Wen Nies, Kauthar Mohd Daud, Muhammad Akmal Remli, Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu , Shahreen Kasim, Ghazali Sulong
págs. 58-65
Development of Text Mining Tools for Information Retrieval from Patents
Tiago Alves, Rúben Rodrigues, Hugo Costa, Miguel Rocha
págs. 66-73
How Can Photo Sharing Inspire Sharing Genomes?
Vinicius V. Cogo, Alysson Bessani, Francisco M. Couto, Margarida Gama Carvalho, Maria Fernandes, Paulo Esteves-Verissimo
págs. 74-82
An App Supporting the Self-management of Tinnitus
Pablo Chamoso Santos , Fernando de la Prieta Pintado , Alberto Eibenstein, Angelo Tizio, Vittorini Pierpaolo
págs. 83-91
Anthropometric Data Analytics: A Portuguese Case Study
António Barata, Lucília Carvalho, Francisco M. Couto
págs. 92-100
Reverse Inference in Symbolic Systems Biology
Beatriz Santos Buitrago, Adrián Riesco Rodríguez , Merrill Knapp, Gustavo Santos García, Carolyn Talcott
págs. 101-109
Skin Temperature Monitoring to Avoid Foot Lesions in Diabetic Patients
María Araceli Queiruga Dios , Juan José Bullón Pérez, María Ascensión Hernández Encinas , J. Martín Vaquero, Alfonso Martínez Nova, José Torreblanca González
págs. 110-117
Multidimensional Feature Selection and Interaction Mining with Decision Tree Based Ensemble Methods
Lukasz Krol, Joanna Polanska
págs. 118-125
A Normalisation Strategy to Optimally Design Experiments in Computational Biology
págs. 126-136
Mitosis Detection in Breast Cancer Using Superpixels and Ensemble Classifiers
César A. Ortiz Toro, Consuelo Gonzalo Martín , Angel Mario García Pedrero, Alejandro Rodríguez González , Ernestina Menasalvas
págs. 137-145
Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis
Joanna Zyla, Michal Marczyk, Joanna Polanska
págs. 146-154
Towards Trustworthy Predictions of Conversion from Mild Cognitive Impairment to Dementia: A Conformal Prediction Approach
Telma Pereira, Sandra Cardoso, Dina Silva, Alexandre de Mendonça, Manuela Guerreiro, Sara C. Madeira
págs. 155-163
Topological Sequence Segments Discriminate Between Class C GPCR Subtypes
Caroline König, René Alquézar Mancho , Alfredo Vellido Alacena , Jesús Giraldo
págs. 164-172
QmihR: Pipeline for Quantification of Microbiome in Human RNA-seq
Bruno Cavadas, Joana Ferreira, Rui Camacho , Nuno A. Fonseca, Luisa Pereira
págs. 173-179
Improving Prognostic Prediction from Mild Cognitive Impairment to Alzheimer’s Disease Using Genetic Algorithms
Francisco L. Ferreira, Sandra Cardoso, Dina Silva, Manuela Guerreiro, Alexandre de Mendonça, Sara C. Madeira
págs. 180-188
Novel Method of Identifying DNA Methylation Fingerprint of Acute Myeloid Leukaemia
Agnieszka Cecotka, Joanna Polanska
págs. 189-196
Metadata Analyser: Measuring Metadata Quality
Bruno Inácio, João D. Ferreira, Francisco M. Couto
págs. 197-204
Vascular Contraction Model Based on Multi-agent Systems
Jaime A. Rincón Arango, Sol Guerra Ojeda, Vicente J. Julián Inglada , Carlos Carrascosa Casamayor
págs. 205-212
Study of the Epigenetic Signals in the Human Genome
Susana Ferreira, Vera Afreixo, Gabriela Moura, Ana Tavares
págs. 213-219
Cloud-Assisted Read Alignment and Privacy
Maria Fernandes, Jérémie Decouchant, Francisco M. Couto, Paulo Esteves Verissimo
págs. 220-227
On the Role of Inverted Repeats in DNA Sequence Similarity
Morteza Hosseini, Diogo Pratas, Armando J. Pinho
págs. 228-236
An Ensemble Approach for Gene Selection in Gene Expression Data
José Antonio Castellanos Garzón, Juan Ramos González, Daniel López Sánchez, Juan Francisco de Paz Santana
págs. 237-247
Dissimilar Symmetric Word Pairs in the Human Genome
Ana Tavares, Jakob Raymaekers, Peter J. Rousseeuw, Raquel M. Silva, Carlos A.C. Bastos, Armando Pinho, Paula Brito, Vera Afreixo
págs. 248-256
A Critical Evaluation of Automatic Atom Mapping Algorithms and Tools
Nuno Osório, Paulo Vilaça, Miguel Rocha
págs. 257-264
Substitutional Tolerant Markov Models for Relative Compression of DNA Sequences
Diogo Pratas, Morteza Hosseini, Armando J. Pinho
págs. 265-272
Biomedical Word Sense Disambiguation with Word Embeddings
Rui Antunes, Sergio Guilherme Alexio de Matos
págs. 273-279
Classification Tools for Carotenoid Content Estimation in Manihot esculenta via Metabolomics and Machine Learning
Rodolfo Moresco, Telma Afonso, Virgílio G. Uarrota, Bruno Bachiega Navarro, Eduardo da C. Nunes, Miguel Rocha, Marcelo Maraschin
págs. 280-288
UV-Vis Spectrophotometry and Chemometrics as Tools for Recognition of the Biochemical Profiles of Organic Banana Peels (Musa sp.) According to the Seasonality in Southern Brazil
Susane Lopes, Rodolfo Moresco, Luiz Augusto Martins Peruch, Miguel Rocha, Marcelo Maraschin
págs. 289-296
Influence of Solar Radiation on the Production of Secondary Metabolites in Three Rice (Oryza sativa) Cultivars
Eva Regina Oliveira, Ester Wickert, Fernanda Ramlov, Rodolfo Moresco, Larissa Simão, Bruno B. Navarro, Claudia Bauer, Debora Queiroz Cabral, Miguel Rocha, Marcelo Maraschin
págs. 297-304
Cryfa: A Tool to Compact and Encrypt FASTA Files
Diogo Pratas, Morteza Hosseini, Armando J. Pinho
págs. 305-312
An Automated Colourimetric Test by Computational Chromaticity Analysis: A Case Study of Tuberculosis Test
Marzia Hoque Tania, K. T. Lwin, Kamal AbuHassan, Noremylia Mohd Bakhori, Umi Zulaikha Mohd Azmi, Nor Azah Yusof, M.A. Hossain
págs. 313-320
Characterization of the Chemical Composition of Banana Peels from Southern Brazil Across the Seasons Using Nuclear Magnetic Resonance and Chemometrics
Sara Cardoso, Marcelo Maraschin, Luiz Augusto Martins Peruch, Miguel Rocha, Aline Pereira
págs. 321-328
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