Paula Huerta, Berke Ozturk, Victor M. González, José R. Villar, Esther Serrano Pertierra, Antonello Novelli Ciotti, Maria Teresa Fernandez Sanchez, Ángel Francisco del Río Álvarez
Microscopy image analysis of neurons cultures represents a formidable challenge due to their complex structure because of the dynamic nature of neurite tissue development, the neuron movement, the morphological changes, and the pres- ence of many elements in the cultures apart from neurons such as glial cells, dead cells, vesicles, etc. A rigorous eval- uation of deep learning techniques to address this intricate problem is undertaken in this study. Several methodolo- gies, including Instance Segmentation and Object Detection models, are scrutinized within a comprehensive experimen- tal framework. The efficacy of the Instance Segmentation model is underscored by the findings, demonstrating superior quantitative results. Precise neuron quantification is facili- tated by this model through the detection of bounding boxes in images, thereby enabling the automation of tasks such as morphological and size analysis of neuronal cells and track- ing individual neurons across ...
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